Hinrichs, Angie S Raney, Brian J Speir, Matthew L Rhead, Brooke Casper, Jonathan Karolchik, Donna Kuhn, Robert M Rosenbloom, Kate R Zweig, Ann S Haussler, David
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Published in
Bioinformatics (Oxford, England)
Two new tools on the UCSC Genome Browser web site provide improved ways of combining information from multiple datasets, optionally including the user's own custom track data and/or data from track hubs. The Data Integrator combines columns from multiple data tracks, showing all items from the first track along with overlapping items from the other...
Danecek, Petr Auton, Adam Abecasis, Goncalo Albers, Cornelis A Banks, Eric DePristo, Mark A Handsaker, Robert E Lunter, Gerton Marth, Gabor T Sherry, Stephen T
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Published in
Bioinformatics (Oxford, England)
The variant call format (VCF) is a generic format for storing DNA polymorphism data such as SNPs, insertions, deletions and structural variants, together with rich annotations. VCF is usually stored in a compressed manner and can be indexed for fast data retrieval of variants from a range of positions on the reference genome. The format was develop...
